Browsing by Author "Hansen, Peter J."
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Item Convergent evolution of slick coat in cattle through truncation mutations in the prolactin receptor(Frontiers Media S.A., 2018-02-23) Porto-Neto, Laercio R.; Bickhart, Derek M.; Landaeta-Hernandez, Antonio J.; Utsunomiya, Yuri T.; Pagan, Melvin; Jimenez, Esbal; Hansen, Peter J.; Schroeder, Steven G.; Kim, Eui-Soo; Sun, Jiajie; Crespo, Edward; Amati, Norman; Cole, John B.; Null, Daniel J.; Garcia, Jose F.; Reverter, Antonio; Barendse, William; Sonstegard, Tad S.; Dikmen, Serdal; Uludağ Üniversitesi/Veterinerlik Fakültesi/Zootekni Bölümü.; 0000-0002-5611-4993; A-5731-2018; 8280302600Evolutionary adaptations are occasionally convergent solutions to the same problem. A mutation contributing to a heat tolerance adaptation in Senepol cattle, a New World breed of mostly European descent, results in the distinct phenotype known as slick, where an animal has shorter hair and lower follicle density across its coat than wild type animals. The causal variant, located in the 11th exon of prolactin receptor, produces a frameshift that results in a truncated protein. However, this mutation does not explain all cases of slick coats found in criollo breeds. Here, we obtained genome sequences from slick cattle of a geographically distinct criollo breed, namely Limonero, whose ancestors were originally brought to the Americas by the Spanish. These data were used to identify new causal alleles in the 11th exon of the prolactin receptor, two of which also encode shortened proteins that remove a highly conserved tyrosine residue. These new mutations explained almost 90% of investigated cases of animals that had slick coats, but which also did not carry the Senepol slick allele. These results demonstrate convergent evolution at the molecular level in a trait important to the adaptation of an animal to its environment.Item Determination of the optimum contribution of Brahman genetics in an Angus-Brahman multibreed herd for regulation of body temperature during hot weather(Oxford University Press, 2018-05-10) Mateescu, Raluca G.; Elzo, Mauricio A.; Hansen, Peter J.; Dikmen, Serdal; Uludağ Üniversitesi/Veterinerlik Fakültesi/Zootekni Anabilim Dalı.; 0000-0002-5611-4993; A-5731-2018; 8280302600The objective was to evaluate the influence of varying amounts of Brahman genetics on body temperature under pasture conditions during hot weather. Vaginal temperatures were measured at 5-min intervals for 3 to 5 d on four occasions during August and September from a total of 190 pregnant cows that were either Angus, 2/8 Brahman (remainder Angus), Brangus (3/8 Brahman), 4/8 Brahman, 6/8 Brahman or Brahman. Vaginal temperature was higher for the first two replicates than for the second two replicates. In the first two replicates, average vaginal temperature did not differ between genetic groups, but average vaginal temperature from 1500 to 1900 h was lower for Brahman than other groups. In the second two replicates, average vaginal temperature was lower for cows that were 4/8 or higher Brahman than for cows that were 2/8 Brahman or Angus. Average vaginal temperature from 1500 to 1900 h was lower for cows that were 4/8 or higher Brahman than for cows that were 2/8 Brahman or Angus. In addition, Brahman cows had lower vaginal temperatures than cows that were 4/8 Brahman or 3/8 Brahman (i.e., Brangus). In one replicate, a tracking device was used to map cow location. At 1200 to 1300 h, cows that were 6/8 Brahman or Brahman had fewer observations near the tree line (i.e., in shade) than cows that were 4/8 Brahman or less. At 1500 to 1600 h, cows that were 4/8 or higher Brahman experienced fewer observations near the tree line than cows that contained a lower fraction of Brahman genetics. In summary, a minimum of 4/8 Brahman genetics was required to increase the ability to regulate body temperature and at least 6/8 Brahman when heat stress was severe. It is likely, therefore, that using Brahman genetics to optimize adaptation to thermal stress under conditions of severe heat stress requires a preponderance of Brahman genes.Item Effectiveness of tunnel ventilation as dairy cow housing in hot climates: Rectal temperatures during heat stress and seasonal variation in milk yield(Springer, 2020-09) Larson, Colleen C.; De Vries, Albert; Hansen, Peter J.; Dikmen, Serdal; Bursa Uludağ Üniversitesi/Veteriner Fakültesi/Zootekni Anabilim Dalı.; 0000-0002-5611-4993; A-5731-2018; 8280302600Tunnel ventilation is an increasingly popular approach to mitigate the effects of heat stress on dairy cattle. Tunnel-ventilation barns use a bank of high-power fans to move air horizontally from one end of the barn to the other at cow level. The overall objective of the present experiments was to determine whether tunnel ventilation is superior to housing with fans and sprinklers with respect to rectal temperature during heat stress and seasonal variation in milk yield. In the first study, rectal temperatures were measured for 1097 lactating Holstein cows in six freestall barns with fans and sprinklers and 575 lactating Holsteins in four tunnel-ventilated freestall barns at a time point between 14:00 and 16:00 h during the months of June to August in Florida, USA. Rectal temperatures were lower for cows in tunnel-ventilation barns than sprinkler-and-fan barns when the tunnel-ventilation barns were built de novo but not when the tunnel-ventilation barns were produced by retrofitting a sprinkler-and-fan barn (interaction, P = 0.0129). In the second study, average daily milk yield in the first 90 days in milk was examined for 8470 lactating Holsteins housed in three sprinkler-and-fan barns and two tunnel-ventilation barns. Milk production for cows calving in cool weather (October to March) was greater (P < 0.0001) than for cows calving in hot weather (April to September). The seasonal reduction in milk yield was less for cows (P = 0.037) in tunnel-ventilation barns (3.5% decrease) than for cows in sprinkler-and-fan barns (5.8% decrease). With this difference in impact of heat stress, it was estimated at a dairy farm could invest up to a $332 more per cow space in a tunnel-ventilated barn than in a sprinkler-and-fan barn. It was concluded that housing cows in tunnel-ventilation barns can reduce the impact of heat stress on body temperature regulation and milk yield.Item Genetic parameters for hair characteristics and core body temperature in a multibreed Brahman-Angus herd(Oxford University Press, 2019-06-19) Davila, Kaitlyn M. Sarlo; Hamblen, Heather; Hansen, Peter J.; Oltenacu, Pascal A.; Mateescu, Raluca G.; Dikmen, Serdal; Bursa Uludağ Üniversitesi/Veteriner Fakültesi/Zootekni ve Hayvan Besleme Bölümü.; 0000-0002-5611-4993; A-5731-2018; 8280302600Thermal stress in hot humid conditions limits cattle production. The objectives for this study were to estimate genetic parameters for hair characteristics and core body temperature under low and high temperature humidity index (THI) conditions. Hair samples were collected and measured for length and diameter. Core body temperature was measured as vaginal temperature every 15 min over a 5-d period using an iButton temperature measuring device implanted in a blank CIDR in 336 heifers from the University of Florida multibreed herd (ranging from 100% Angus to 100% Brahman). Restricted maximum likelihood procedures were used to estimate heritabilities from multiple bivariate animal models using the WOMBAT program. Estimates of heritability for hair diameter, undercoat length, topcoat length, body temperature under low THI conditions, and body temperature under high THI conditions were 0.50, 0.67, 0.42, 0.32, and 0.26, respectively. The genetic parameters estimated in this study indicate a large, exploitable genetic variance which can be selected upon to improve tolerance in cattle. Breed effects for differing compositions of Brahman and Angus were also estimated. As Brahman breed composition increased by 25% undercoat length, topcoat length, body temperature under low THI conditions, and body temperature under high THI conditions decreased by 1.32 mm, 2.94 mm, 0.11 degrees C, and 0.14 degrees C, respectively. Under both low and high THI conditions, cattle with 25% Brahman breed composition or greater maintained a significantly lower body temperature than the 100% Angus breed group. The incorporation of Brahman germplasm is recommended for herds that often experience heat stress conditions in order to increase resilience to heat stress.Item Genome-wide association mapping for identification of quantitative trait loci for rectal temperature during heat stress in holstein cattle(Public Library Science, 2013-07-23) Cole, John B.; Null, Daniel J.; Hansen, Peter J.; Dikmen, Serdal; Uludağ Üniversitesi/Veterinerlik Fakültesi/Hayvan Bilimleri Anabilim Dalı.; 0000-0002-5611-4993; A-5731-2018; 8280302600Heat stress compromises production, fertility, and health of dairy cattle. One mitigation strategy is to select individuals that are genetically resistant to heat stress. Most of the negative effects of heat stress on animal performance are a consequence of either physiological adaptations to regulate body temperature or adverse consequences of failure to regulate body temperature. Thus, selection for regulation of body temperature during heat stress could increase thermotolerance. The objective was to perform a genome-wide association study (GWAS) for rectal temperature (RT) during heat stress in lactating Holstein cows and identify SNPs associated with genes that have large effects on RT. Records on afternoon RT where the temperature-humidity index was >= 78.2 were obtained from 4,447 cows sired by 220 bulls, resulting in 1,440 useable genotypes from the Illumina BovineSNP50 BeadChip with 39,759 SNP. For GWAS, 2, 3, 4, 5, and 10 adjacent SNP were averaged to identify consensus genomic regions associated with RT. The largest proportion of SNP variance (0.07 to 0.44%) was explained by markers flanking the region between 28,877,547 and 28,907,154 bp on Bos taurus autosome (BTA) 24. That region is flanked by U1 (28,822,883 to 28,823,043) and NCAD (28,992,666 to 29,241,119). In addition, the SNP at 58,500,249 bp on BTA 16 explained 0.08% and 0.11% of the SNP variance for 2- and 3-SNP analyses, respectively. That contig includes SNORA19, RFWD2 and SCARNA3. Other SNPs associated with RT were located on BTA 16 (close to CEP170 and PLD5), BTA 5 (near SLCO1C1 and PDE3A), BTA 4 (near KBTBD2 and LSM5), and BTA 26 (located in GOT1, a gene implicated in protection from cellular stress). In conclusion, there are QTL for RT in heat-stressed dairy cattle. These SNPs could prove useful in genetic selection and for identification of genes involved in physiological responses to heat stress.Item Genotype effects on body temperature in dairy cows under grazing conditions in a hot climate including evidence for heterosis(Springer, 2009-07) Martins, Larissa Oliveira; Pontes, Eduardo Oliveira; Hansen, Peter J.; Dikmen, Serdal; Uludağ Üniversitesi/Veteriner Fakültesi/Hayvan Bilimleri Bölümü.; 0000-0002-5611-4993; A-5731-2018; 8280302600We compared diurnal patterns of vaginal temperature in lactating cows under grazing conditions to evaluate genotype effects on body temperature regulation. Genotypes evaluated were Holstein, Jersey, Jersey x Holstein and Swedish Red x Holstein. The comparison of Holstein and Jersey versus Jersey x Holstein provided a test of whether heterosis effects body temperature regulation. Cows were fitted with intravaginal temperature recording devices that measured vaginal temperature every 15 min for 7 days. Vaginal temperature was affected by time of day (P < 0.0001) and genotype x time (P < 0.0001) regardless of whether days in milk and milk yield were used as covariates. Additional analyses indicated that the Swedish Red x Holstein had a different pattern of vaginal temperatures than the other three genotypes (Swedish Red x Holstein vs others x time; P < 0.0001) and that Holstein and Jersey had a different pattern than Jersey x Holstein [(Holstein + Jersey vs Jersey x Holstein) x time, P < 0.0001]. However, Holstein had a similar pattern to Jersey [(Holstein vs Jersey) x time, P > 0.10]. These genotype x time interactions reflect two effects. First, Swedish Red x Holstein had higher vaginal temperatures than the other genotypes in the late morning and afternoon but not after the evening milking. Secondly, Jersey x Holstein had lower vaginal temperatures than other genotypes in the late morning and afternoon and again in the late night and early morning. Results point out that there are effects of specific genotypes and evidence for heterosis on regulation of body temperature of lactating cows maintained under grazing conditions and suggest that genetic improvement for thermotolerance through breed choice or genetic selection is possible.Item Postnatal phenotype of dairy cows is altered by in vitro embryo production using reverse X-sorted semen(Elsevier, 2017-07) Siqueira, Luiz G.B.; Ortega, M. Sofia; Hansen, Peter J.; Dikmen, Serdal; Uludağ Üniversitesi/Veteriner Fakültesi/Hayvan Bilimleri Anabilim Dalı.; 0000-0002-5611-4993; A-5731-2018; 8280302600Abnormal fetuses, neonates, and adult offspring derived by assisted reproductive technologies have been reported in humans and mice and have been associated with increased likelihood of certain adult diseases. To test the hypothesis that bovine females derived by assisted reproductive technologies have altered postnatal growth and adult function, a retrospective cohort study evaluated survival, growth, and production traits of offspring derived by in vitro embryo production (IVP) with conventional (IVP-conv) or reverse X-sorted semen (IVP-sexed), multiple ovulation and embryo transfer, and artificial insemination (AI) in a large dairy herd. Live calves produced by IVP were born slightly heavier compared with AI calves. In addition, IVP-sexed calves had a higher cumulative mortality from 90 to 180 d of age compared with AI offspring. Mortality of IVP-conv and multiple ovulation and embryo transfer offspring was intermediate and not different from AI or IVP-sexed offspring. The altered phenotype of offspring from IVP-sexed extended to adult milk production. Cows derived by IVP-sexed produced less milk, fat, and protein in their first lactation compared with dairy cows derived by AI. Additionally, females born to nulliparous dams had a distinct postnatal phenotype compared with offspring from parous dams even when data were restricted to offspring of surrogate females. In conclusion, procedures associated with in vitro production of embryos involving use of reverse-sorted spermatozoa for fertilization result in an alteration of embryonic programming that persists postnatally and causes an effect on milk production in adulthood. Thus, some benefits of reverse-sorted semen for genetic improvement may be offset by adverse programming events.