Association of reversible inactivation of the maize transposable element Ds with tissue-specific processing of the 35S : TPase transcript in carrot (Daucus carota L.)

dc.contributor.authorSimon, Philipp W.
dc.contributor.authorİpek, Meryem
dc.contributor.buuauthorİpek, Ahmet
dc.contributor.departmentUludağ Üniversitesi/Ziraat Fakültesi/Ziraat Fakültesi Bahçe Bitkileri Bölümü.tr_TR
dc.contributor.researcheridAAH-3233-2021tr_TR
dc.contributor.scopusid6603912485tr_TR
dc.date.accessioned2022-01-24T10:37:22Z
dc.date.available2022-01-24T10:37:22Z
dc.date.issued2006-09
dc.description.abstractAn Ac/Ds-based two-element transposon tagging system has been introduced into carrot. F-1 progeny containing both the 35S-Ac-transposase gene (35S:TPase) and the Ds element were derived from crosses between 35S:TPase- and Ds-bearing parents. While excision of Ds was not detected in any F-1 plants carrying both 35S:TPase and the Ds element, calli initiated from these F-1 plants had the Ds element excised, indicating Ds transposition. Reverse transcriptase-PCR analysis revealed that the 35S:TPase gene was expressed in both F-1 plants and calli, and that introns 1, 2, and 3 were spliced correctly. Although intron 4 was also spliced correctly in calli, incorrectly spliced intron 4 was detected in F-1 plants. Sequence analysis of incorrectly spliced reverse transcriptase-PCR products demonstrated the presence of a cryptic intron donor site within intron 4 of the 35S:TPase transcript. This probably competed with the proposed intron donor site during maturation of the major 35S:TPase transcript. These results suggested that the major transcript of 35S:TPase was incorrectly processed and, consequently, that the Ds element was reversibly inactivated in the somatic tissues of carrot plants, whereas this inactive Ds element was remobilised during tissue culture, where the 35S:TPase transcript was spliced correctly. These observations point to an important role for tissue-specific 35S:TPase transcript processing for successful transposition of Ds in carrot. Therefore, successful processing of the 35S:TPase transcript in carrot callus may indicate strategies to increase Ac transposition in other tissues.en_US
dc.identifier.citationİpek, A. vd. (2006). ''Association of reversible inactivation of the maize transposable element Ds with tissue-specific processing of the 35S : TPase transcript in carrot (Daucus carota L.)''. Journal of Horticultural Science and Biotechnology, 81(5), 819-826.en_US
dc.identifier.endpage826tr_TR
dc.identifier.issn1462-0316
dc.identifier.issn2380-4084
dc.identifier.issue5tr_TR
dc.identifier.scopus2-s2.0-33749035969tr_TR
dc.identifier.startpage819tr_TR
dc.identifier.urihttps://doi.org/10.1080/14620316.2006.11512144
dc.identifier.urihttps://www.tandfonline.com/doi/abs/10.1080/14620316.2006.11512144
dc.identifier.urihttp://hdl.handle.net/11452/24257
dc.identifier.volume81tr_TR
dc.identifier.wos000241099800008
dc.indexed.scopusScopusen_US
dc.indexed.wosSCIEen_US
dc.language.isoenen_US
dc.publisherTaylor & Francisen_US
dc.relation.collaborationYurt içitr_TR
dc.relation.collaborationYurt dışıtr_TR
dc.relation.journalJournal of Horticultural Science and Biotechnologyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergitr_TR
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectAgricultureen_US
dc.subjectZea maysen_US
dc.subjectDaucus carotaen_US
dc.subjectSystemen_US
dc.subjectCultureen_US
dc.subjectCytotypeen_US
dc.subjectReplicationen_US
dc.subjectDNAen_US
dc.subjectTranspositionen_US
dc.subjectActivator acen_US
dc.subjectMessenger-rnaen_US
dc.subjectDissociation excisionen_US
dc.subject.scopusT-Dna; Transposons; Functional Genomicsen_US
dc.subject.wosHorticultureen_US
dc.titleAssociation of reversible inactivation of the maize transposable element Ds with tissue-specific processing of the 35S : TPase transcript in carrot (Daucus carota L.)en_US
dc.typeArticle
dc.wos.quartileQ2en_US

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